rs244540147 SNP Detail

Summary

• ID
  rs244540147
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44386697 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aTCTTGTAT TGATTGGATG AAGTGATTTT
  CCTTTCTAGT GTCTGTTGCT gtggtggtgg atatctgtat cactgaaatt tgggttgagg
  taggtggact tggtttggag ccagcctagg ctacatagtg agaccctctc tcgaaacagc
  Y
  aaGTGTGTTg gggttggaga gttggctcag caattaagag catcactgac tgctcttcca
  gaggtcctta gttcaattcc cagtaaccac atggtgtctc acaaccatct gtaatgggat
  ccgatacccc cttcttgtgt gtctgaaggc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322940972	CHEV_9_44283483	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244540147					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44386697 () rs orientation: forward

Symbol	Name	Function Class
C030014I23Rik	RIKEN cDNA C030014I23 gene	within coordinates
Gm22540	predicted gene, 22540	1011 bp downstream
Gm47204	predicted gene, 47204	1312 bp downstream
Rr195027	regulatory region 195027	1897 bp distal
Rr195028	regulatory region 195028	504 bp proximal
Rr203856	regulatory region 203856	1947 bp distal
Rr203857	regulatory region 203857	543 bp proximal
Rr209142	regulatory region 209142	497 bp distal
Rr209143	regulatory region 209143	904 bp proximal