rs244543524 SNP Detail

Summary

• ID
  rs244543524
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54867009 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGTCAAGG GTCACCTTGC
  TAGCCCTTAC CTAGGAAGAT AAGCCTCAGA GCACTCAACA AGCGGAGAAC AGTGAAAGAA
  AGCACTGTCT TAGCTTTCTA TTTTGATGAT AAGATACCGT GACCGAAAGC AGCTTGTGGA
  GGAAAGGGTT TGCTTACTTC AGCTTACACT TTCAGGTAAC AGTCCATCAC TGAGGGAAAT
  Y
  AGGGCAGGAA CTCAGAGGCA GGAGCTGATG CTGCAGAGGC CATGGAGGAG TGCTGCTTAC
  AGGCTTGTTC TCCGTGCTTT TCTCAGCCTG ATTCTCTTAC AGAACCCAGG GCCACACCGG
  TCCAGGGCAC CACCACCCTC AATAGGTTAG TCCCTCCCAT GTCAATCACT ACGAAAATGC
  CCAACAGGCT TCCTACAGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322966287	CHEV_9_54807532	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244543524					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54867009 () rs orientation: forward

Symbol	Name	Function Class
Psma4	proteasome subunit alpha 4	1695 bp downstream
Rr204186	regulatory region 204186	786 bp proximal
Rr209620	regulatory region 209620	1192 bp proximal