rs244550619 SNP Detail

Summary

• ID
  rs244550619
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84513322 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACACGCCAC CTCCTCAGCT ATCATCCCAC
  CCTAACCACC CACACAACCC AGACGTGGCC AGCAGGCTGG GTCTTCCCGG ATGCCCAACT
  CTACTAGCTG ACCTCTTGGC ATCACAGATG GATTATTCCT GACCAACATT TCCAGTCATT
  S
  CAAAAATTCT TGGAGTATGA GTTAAGGCTG GGTGTGTTTG GAGTGGAGAG TAAGTAATGA
  GGAAGTTtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgAGTAA
  AGGAAGGGCA GCCCAATTTC GTGCACAGAA                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325261462	CHEV_16_84716679	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244550619					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84513322 () rs orientation: forward

Symbol	Name	Function Class
Mir155hg	Mir155 host gene (non-protein coding)	1189 bp downstream
Mrpl39	mitochondrial ribosomal protein L39	1746 bp downstream
Rr518523	regulatory region 518523	239 bp distal
Tssr139174	transcription start site region 139174	1446 bp downstream
Tssr139175	transcription start site region 139175	1347 bp downstream
Tssr139176	transcription start site region 139176	814 bp downstream