rs244619990 SNP Detail

Summary

• ID
  rs244619990
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156081574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAGGGCTG GCCCAGGGCT
  GCCTAGGAAA AGATATAACA AATCAATATG TTAAGAGCTG ATGGGGGGAA GGGGACATAG
  GCTGGTCTGT TTGGGTACCT ACATTCCCTC CCTCCCTTCC TCCCTCCCTC CCTCCCTTCC
  TTCCTTTCTT TTTCTCTGTG GTAAGATCTT ACTGTGTAGC CCTGGCTGGC CTTGGACTCA
  M
  AACTGGTCCA TCTGCTGCTG CTTGTCTGCT TGCTTGCTTG CTAGCCTGCT TTGTGGATTT
  TTAGAGACAT GATCTCTCTA TTAAATAGCC CTGGCTATCC TAGATTTTAA TATGTAGACC
  AGCAGGCCTC TCTCTCTCAA ATCCAGGGAC GGATAATGTC CACCGTCACA CCTGGCTCTA
  TCTCTGCTTT CTCAATGCTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321444436	CHEV_4_155371226	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244619990					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156081574 () rs orientation: forward

Symbol	Name	Function Class
Sdf4	stromal cell derived factor 4	within coordinates
Tssr40753	transcription start site region 40753	761 bp downstream