rs244646345 SNP Detail

Summary

• ID
  rs244646345
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109905511 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAACAAGAGG ATTCGTTTAT
  TTCCTTTTCG GTAGCACTTT TAAACTTCAG TTTAAAATGT AAGTTGTTGC TAAGGTAAAG
  TTTGCATTTG GAATCTGTGT AGACCAAACC CAGTGCCCCA TGCTCTACAA ATGAGCAAAC
  CTCTTTGGCC CCATGCATTA TTTTATGTCA TAGGTCAAAG CCCAGCCTAA TTAAGGGATT
  R
  GTTCAAGGTC ACACAATTAA TCAAAAGATG GCAACTTGCT GCCAGCCCTT CTTGATGGCA
  GCTGCTCCAA GCAGGCTACT GGGTCGACTG TGTCATCTAG GATAGGAGCA GCAGGAACAG
  TGCTTTGTGG AAGTGTACAG GGTTCAATCA GTACACAGGG CTGCACACAG ATGCCACATG
  GCTGCTATCC TGAGCCACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322395861	CHEV_7_117449818	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244646345					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109905511 () rs orientation: forward

Symbol	Name	Function Class
Rr159222	regulatory region 159222	510 bp distal
Rr159223	regulatory region 159223	111 bp distal
Rr159224	regulatory region 159224	490 bp proximal
Sbf2	SET binding factor 2	1709 bp downstream