rs244744552 SNP Detail

Summary

• ID
  rs244744552
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:112425185 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAG GGTTTGGGAT GTTTTGTCTG
  A
  CTGCTTGGGG GAAGGGTATA TAATA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324528917	CHEV_13_113078859	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244744552					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:112425185 () rs orientation: forward

Symbol	Name	Function Class
Ankrd55	ankyrin repeat domain 55	within coordinates
Rr486330	regulatory region 486330	within coordinates
Rr486331	regulatory region 486331	180 bp proximal
Tssr121099	transcription start site region 121099	144 bp downstream
Tssr121100	transcription start site region 121100	103 bp downstream
Tssr121101	transcription start site region 121101	57 bp downstream
Tssr121102	transcription start site region 121102	139 bp upstream
Tssr124046	transcription start site region 124046	497 bp downstream