rs244751964 SNP Detail

Summary

• ID
  rs244751964
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60959694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGAATTCC CAGTGAGCCA
  TCACCTTTAT CTCACTGCTG GTATTCCCAG CAGTTCCTCT CTGTAACCAG TCCTCAAAAT
  GAGTGCCATT TTTTTCTCTA CTCTCTTTGA ATTTCCCCCT TCTCTATTCT CTAAACACAG
  TAGTTCGGTA TGGACCCAGA CTTTGACTAT TTTAGGTGCT ATGAACTAAT TCTGTTACAG
  Y
  TACTCACCTC TGGTGCTGTG GCAGTGTACT GTGTGCTAAG GTTCCGACAC AGCTTAACTA
  TATGAATGCT GAAATCTTTC ATATAATGCT GTATCACAAA ATATTCTTTC TAGCCAACTC
  TCTGAAAATG TAAAGATCAA GTTCATGCAA ACAATCCCAG CACTTAAGAG TCCAGAACAG
  TACCACAGTT CAGGGGCGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323327709	CHEV_10_60586663	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244751964					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60959694 () rs orientation: forward

Symbol	Name	Function Class
Gm55864	predicted gene, 55864	1222 bp downstream
Rr228136	regulatory region 228136	1494 bp distal
Rr401931	regulatory region 401931	1780 bp downstream
Sgpl1	sphingosine phosphate lyase 1	within coordinates