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rs244763011 SNP Detail
Summary
  • ID
    rs244763011
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr7:44129710 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          CACAC CTTCTCCTTA TCTCACCCTC
Y
CCCTGCATCT CCTCTTTCTC CAACT                                      

Y = C/T

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID		 Submitter
Handle		 Population
ss orientation
 Variation Type
LG/J
SM/J
ss322198941 CHEV_7_51735656 CHEVERUD SCREENING_POP f SNP C T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs244763011 SNP C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr7:44129710 () rs orientation: forward
Symbol Name Transcript Protein Function
Class		 Allele Residue Codon
Position		 AA
Position
Tssr2227 transcription start site region 2227 1266 bp downstream
Tssr2228 transcription start site region 2228 203 bp downstream
Tssr2229 transcription start site region 2229 68 bp upstream
Tssr2230 transcription start site region 2230 247 bp upstream
Tssr2231 transcription start site region 2231 380 bp upstream
Tssr2232 transcription start site region 2232 555 bp upstream
Tssr2233 transcription start site region 2233 588 bp upstream
Tssr2234 transcription start site region 2234 747 bp upstream
Tssr2235 transcription start site region 2235 1381 bp upstream
Tssr66271 transcription start site region 66271 1983 bp downstream
Tssr66272 transcription start site region 66272 1931 bp downstream
Tssr66273 transcription start site region 66273 1913 bp downstream
Tssr66274 transcription start site region 66274 1908 bp downstream
Tssr66275 transcription start site region 66275 1888 bp downstream
Tssr66276 transcription start site region 66276 1868 bp downstream
Tssr66277 transcription start site region 66277 1848 bp downstream
Tssr66278 transcription start site region 66278 1804 bp downstream
Tssr66279 transcription start site region 66279 1759 bp downstream
Tssr66280 transcription start site region 66280 1737 bp downstream
Tssr66281 transcription start site region 66281 1697 bp downstream
Tssr66282 transcription start site region 66282 1680 bp downstream
Tssr66283 transcription start site region 66283 1666 bp downstream
Tssr66284 transcription start site region 66284 1654 bp downstream
Tssr66285 transcription start site region 66285 1640 bp downstream
Tssr66286 transcription start site region 66286 1601 bp downstream
Tssr66287 transcription start site region 66287 1565 bp downstream
Tssr66288 transcription start site region 66288 1540 bp downstream
Tssr66289 transcription start site region 66289 1458 bp downstream
Tssr66290 transcription start site region 66290 1420 bp downstream
Tssr66291 transcription start site region 66291 1394 bp downstream
Tssr66292 transcription start site region 66292 1362 bp downstream
Tssr66293 transcription start site region 66293 1340 bp downstream
Tssr66294 transcription start site region 66294 1316 bp downstream
Tssr66295 transcription start site region 66295 1051 bp downstream
Tssr66296 transcription start site region 66296 880 bp downstream
Tssr66297 transcription start site region 66297 856 bp downstream
Tssr66298 transcription start site region 66298 801 bp downstream
Tssr66299 transcription start site region 66299 781 bp downstream
Tssr66300 transcription start site region 66300 758 bp downstream
Tssr66301 transcription start site region 66301 742 bp downstream
Tssr66302 transcription start site region 66302 701 bp downstream
Tssr66303 transcription start site region 66303 692 bp downstream
Tssr66304 transcription start site region 66304 687 bp downstream
Tssr66305 transcription start site region 66305 648 bp downstream
Tssr66306 transcription start site region 66306 594 bp downstream
Tssr66307 transcription start site region 66307 545 bp downstream
Tssr66308 transcription start site region 66308 528 bp downstream
Tssr66309 transcription start site region 66309 478 bp downstream
Tssr66310 transcription start site region 66310 409 bp downstream
Tssr66311 transcription start site region 66311 386 bp downstream
Tssr66312 transcription start site region 66312 367 bp downstream
Tssr66313 transcription start site region 66313 357 bp downstream
Tssr66314 transcription start site region 66314 339 bp downstream
Tssr66315 transcription start site region 66315 332 bp downstream
Tssr66316 transcription start site region 66316 267 bp downstream
Tssr66317 transcription start site region 66317 251 bp downstream
Tssr66318 transcription start site region 66318 210 bp downstream
Tssr66319 transcription start site region 66319 182 bp downstream
Tssr66320 transcription start site region 66320 158 bp downstream
Tssr66321 transcription start site region 66321 134 bp downstream
Tssr66322 transcription start site region 66322 118 bp downstream
Tssr66323 transcription start site region 66323 80 bp downstream
Tssr66324 transcription start site region 66324 27 bp downstream
Tssr66325 transcription start site region 66325 within coordinates
Tssr66326 transcription start site region 66326 15 bp upstream
Tssr66327 transcription start site region 66327 29 bp upstream
Tssr66328 transcription start site region 66328 45 bp upstream
Tssr66329 transcription start site region 66329 84 bp upstream
Tssr66330 transcription start site region 66330 103 bp upstream
Tssr66331 transcription start site region 66331 117 bp upstream
Tssr66332 transcription start site region 66332 138 bp upstream
Tssr66333 transcription start site region 66333 186 bp upstream
Tssr66334 transcription start site region 66334 198 bp upstream
Tssr66335 transcription start site region 66335 207 bp upstream
Tssr66336 transcription start site region 66336 216 bp upstream
Tssr66337 transcription start site region 66337 234 bp upstream
Tssr66338 transcription start site region 66338 290 bp upstream
Tssr66339 transcription start site region 66339 341 bp upstream
Tssr66340 transcription start site region 66340 386 bp upstream
Tssr66341 transcription start site region 66341 431 bp upstream
Tssr66342 transcription start site region 66342 493 bp upstream
Tssr66343 transcription start site region 66343 525 bp upstream
Tssr66344 transcription start site region 66344 670 bp upstream
Tssr66345 transcription start site region 66345 703 bp upstream
Tssr66346 transcription start site region 66346 759 bp upstream
Tssr66347 transcription start site region 66347 797 bp upstream
Tssr66348 transcription start site region 66348 838 bp upstream
Tssr66349 transcription start site region 66349 862 bp upstream
Tssr66350 transcription start site region 66350 890 bp upstream
Tssr66351 transcription start site region 66351 898 bp upstream
Tssr66352 transcription start site region 66352 934 bp upstream
Tssr66353 transcription start site region 66353 1008 bp upstream
Tssr66354 transcription start site region 66354 1022 bp upstream
Tssr66355 transcription start site region 66355 1049 bp upstream
Tssr66356 transcription start site region 66356 1066 bp upstream
Tssr66357 transcription start site region 66357 1080 bp upstream
Tssr66358 transcription start site region 66358 1092 bp upstream
Tssr66359 transcription start site region 66359 1118 bp upstream
Tssr66360 transcription start site region 66360 1130 bp upstream
Tssr66361 transcription start site region 66361 1156 bp upstream
Tssr66362 transcription start site region 66362 1188 bp upstream
Tssr66363 transcription start site region 66363 1205 bp upstream
Tssr66364 transcription start site region 66364 1238 bp upstream
Tssr66365 transcription start site region 66365 1258 bp upstream
Tssr66366 transcription start site region 66366 1278 bp upstream
Tssr66367 transcription start site region 66367 1306 bp upstream
Tssr66368 transcription start site region 66368 1328 bp upstream
Tssr66369 transcription start site region 66369 1362 bp upstream
Tssr66370 transcription start site region 66370 1404 bp upstream
Tssr66371 transcription start site region 66371 1829 bp upstream
Tssr66372 transcription start site region 66372 1992 bp upstream
Tssr72200 transcription start site region 72200 1845 bp upstream
Tssr72201 transcription start site region 72201 1335 bp upstream
Tssr72202 transcription start site region 72202 478 bp upstream
Tssr72203 transcription start site region 72203 98 bp upstream
Tssr72204 transcription start site region 72204 489 bp downstream
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory