rs244803067 SNP Detail

Summary

• ID
  rs244803067
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:59436487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAATTCCTG CCTCCATGGT
  CCTGCCTTGA GTGTTTGCCT TGACTTCTTT CTCTAAAGGA CTGTGATCTG AGAATTGTAA
  GCTAAAATAA ACTCTTTCCT CCCCAAATTG TTTCTGGCTG TGCTGTTTTA TCACAGTAGA
  AACCCTAAGA CAGAGACCCA AGGGGGAAGG AAGAAAGCCT ACTGAAGTAC CAGATGTCAG
  W
  GGTGGAGGGG AGCCATTCTA GAAAGCTGAG ACATCAAATA CCCAAAGTAA TGGTAAAATT
  CACTAGGCAA CCAATAATCC CTACACTGGG GAGGCAGAGG CAGGGAGATA TCTGAGTTCA
  AGGTCAGCCT GGTCTACAAA GAAAGCCAGA GCTACACAGA GAAACCTTGT CTCAGGAAAA
  AACCCAAACA ACAACAAAGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321141016	CHEV_4_59449359	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244803067					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59436487 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14346	CpG island 14346	1402 bp proximal
Rr101075	regulatory region 101075	513 bp proximal
Susd1	sushi domain containing 1	within coordinates
Tssr37430	transcription start site region 37430	1666 bp upstream
Tssr41933	transcription start site region 41933	1803 bp downstream
Tssr41934	transcription start site region 41934	1858 bp downstream