rs244827874 SNP Detail

Summary

• ID
  rs244827874
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56498434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACAGGCAG GGCCGGCAGG
  GTGGGGCTCC AGCTGAGGGA AGTAAAGGGA TAATCTGAAG CACCAGTTGC TGCATTAGAG
  GTGCTCAGGA GCCCATCAGC TCTAAGAAGG CAAACTGAGT TATTCAGCTC ATACTGCAAT
  GCTAACCCTG GTTGAAATGT GCTTGACTCC TTATCAGTGA CTCTGGTGAC AGTCTGTTTC
  Y
  CCCTCATGAG ACTTGCTAGA CCCTCTCTCC TCCCAAGCAC CTTAGGATGA AGGCGGAGCC
  TCCATGGAAT CTTTCTAGGC AGGTATGGAC TGGTTTTTTT GCTCCTCACC TTCCTTCACA
  GTGAGCAGCA GTCAGCACAA AGTCCTCTCG AATAAGGAAG CCCCCACATA TCGCCTCAGG
  CTGCTGATCC TTGATCGAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324645021	CHEV_14_56879814	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244827874					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56498434 () rs orientation: forward

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	1192 bp proximal
Tssr128924	transcription start site region 128924	1195 bp downstream
Tssr128925	transcription start site region 128925	1240 bp downstream
Tssr128926	transcription start site region 128926	1256 bp downstream