rs244853803 SNP Detail

Summary

• ID
  rs244853803
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:47122801 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTCTGAGC ATCTGCGTCG
  GACCCGACCC TTCTTCACTT CCCCTGTCCG CTTTGGGGCT TTGACCATTG TGAACTCCTT
  AGTCCATTCC GTGTTGTAGC TACGGTAGCA TGAATGATTG ATTTTTCTCT CCTGCGCTTT
  CCTTGGAAAT AAGTAAGTCA GGTCACGTAG AGTCTGGATT TTCTGCCACC CCCCCCCCCC
  Y
  TTTCGGGTAA CGTGGCTCGC TGGCTTTCAG CAATACACCA GGAAGCTCAG GACTGCCCCT
  TCAGTCACTG AGCTCAGACA GGCTGTAAGA ATACCTGAAA ATGCAATTTT ATTATTCATT
  CTCCTTCAAC CCCCACGGAT AGCACTGTTT TAGAGGTTTG TCTTCCGAAT AATATGTAGG
  TGACGCTATA GACTGTTAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324592438	CHEV_14_47505019	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244853803					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:47122801 () rs orientation: forward

Symbol	Name	Function Class
2810457G06Rik	RIKEN cDNA 2810457G06 gene	280 bp upstream
Cpgi6376	CpG island 6376	193 bp distal
Rr297079	regulatory region 297079	within coordinates
Samd4	sterile alpha motif domain containing 4	within coordinates
Tssr4382	transcription start site region 4382	1294 bp downstream
Tssr125243	transcription start site region 125243	759 bp downstream
Tssr128301	transcription start site region 128301	315 bp upstream