rs244892650 SNP Detail

Summary

• ID
  rs244892650
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:55122046 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAT GATTGAACCT GGGGCTTCTG
  K
  CATGCATTCT ACCAACTGAC CTACA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322967301	CHEV_9_55062569	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244892650					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:55122046 () rs orientation: forward

Symbol	Name	Function Class
Fbxo22	F-box protein 22	within coordinates
Rr383398	regulatory region 383398	441 bp upstream
Rr679266	regulatory region 679266	420 bp proximal
Tssr85210	transcription start site region 85210	896 bp downstream
Tssr85211	transcription start site region 85211	851 bp downstream
Tssr85212	transcription start site region 85212	1643 bp upstream