rs244906499 SNP Detail

Summary

• ID
  rs244906499
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:129200334 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTTGAAGC AACCTCATCT CTCTGAACAA
  GCTTAAGAAG TTCTCTGGAT CAAAGCTGTC AGAAACCAGG AGGGTTTGGA ACAAGTGTCA
  GAGTAGGCAA AGGACCTCCA GAACTCCAGC TCCTTCCTCG CCTGCCTGAG AGAGATCTGG
  G
  CTGCATCTCT GCCTACCTTA CCTGGGTGGG CTAGGACTCT CAGGCTACTA GCTGCCTCTG
  ACATCCCTAC CTAGGAGGCA AACTTCCCAC ACCTCACTAG CTCTAGGACC AAGGATGCTT
  TAAACCAAAG GATCCAAAGG ATTCTGGCTT                                 
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319968991	CHEV_1_131169174	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244906499					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:129200334 () rs orientation: forward

Symbol	Name	Function Class
Cpgi699	CpG island 699	520 bp proximal
Rr28456	regulatory region 28456	466 bp proximal
Thsd7b	thrombospondin, type I, domain containing 7B	705 bp upstream
Tssr8548	transcription start site region 8548	839 bp upstream
Tssr8549	transcription start site region 8549	874 bp upstream
Tssr8550	transcription start site region 8550	894 bp upstream