rs244914198 SNP Detail

Summary

• ID
  rs244914198
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110681080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGTTGAAC TTTCACTGCA TTGCAGCCCT
  CAGAAGACTA AAATAGAACG AAGTCAAAAC CCACAAATAC ACAATAAAAC CTGTTTAGCC
  CCGTGGATTC TCTTAGTATT CAAGGATGCA AAGAACAGCT TTTGTGAGAA AAATAAAATG
  R
  AAAAAAATCT GGATGCTGCC TAGGAAGCAG CCGTATTATG GGGCCTTTAA AATTAAACAG
  AAATGCTATC AAGACCGGCG GTGCTACAAG GGATATGTCT GCGGTACTAA AATGGGTGGC
  CGGGGTGGTG ACAGGCCGGC CAGAGCCTCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322401268	CHEV_7_118225387	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244914198					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110681080 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19582	CpG island 19582	98 bp proximal
Eif4g2	eukaryotic translation initiation factor 4, gamma 2	within coordinates
Gm57201	predicted gene, 57201	692 bp upstream
Rr166519	regulatory region 166519	1879 bp distal
Rr166520	regulatory region 166520	within coordinates
Rr381309	regulatory region 381309	within coordinates
Tssr2372	transcription start site region 2372	1551 bp upstream
Tssr68538	transcription start site region 68538	1680 bp downstream
Tssr68539	transcription start site region 68539	1301 bp upstream
Tssr68540	transcription start site region 68540	1337 bp upstream
Tssr68541	transcription start site region 68541	1451 bp upstream
Tssr74295	transcription start site region 74295	1560 bp upstream
Tssr74296	transcription start site region 74296	927 bp upstream
Tssr74297	transcription start site region 74297	236 bp upstream
Tssr74298	transcription start site region 74298	153 bp downstream
Tssr74299	transcription start site region 74299	342 bp downstream
Tssr74300	transcription start site region 74300	574 bp downstream
Tssr74301	transcription start site region 74301	656 bp downstream
Tssr74302	transcription start site region 74302	735 bp downstream
Tssr74303	transcription start site region 74303	1124 bp downstream