rs244958060 SNP Detail

Summary

• ID
  rs244958060
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56498379 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGCAGAC GTAAGAGACG
  TGGAGTCAGA GAGGATGCTG CCCAGGAGGT GTGAAGGACA GGCAGGGCCG GCAGGGTGGG
  GCTCCAGCTG AGGGAAGTAA AGGGATAATC TGAAGCACCA GTTGCTGCAT TAGAGGTGCT
  CAGGAGCCCA TCAGCTCTAA GAAGGCAAAC TGAGTTATTC AGCTCATACT GCAATGCTAA
  Y
  CCTGGTTGAA ATGTGCTTGA CTCCTTATCA GTGACTCTGG TGACAGTCTG TTTCCCCCTC
  ATGAGACTTG CTAGACCCTC TCTCCTCCCA AGCACCTTAG GATGAAGGCG GAGCCTCCAT
  GGAATCTTTC TAGGCAGGTA TGGACTGGTT TTTTTGCTCC TCACCTTCCT TCACAGTGAG
  CAGCAGTCAG CACAAAGTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324645018	CHEV_14_56879759	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244958060					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56498379 () rs orientation: forward

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	1247 bp proximal
Tssr128924	transcription start site region 128924	1250 bp downstream
Tssr128925	transcription start site region 128925	1295 bp downstream
Tssr128926	transcription start site region 128926	1311 bp downstream