rs245042998 SNP Detail

Summary

• ID
  rs245042998
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:97443842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCACCATTA GCATTCTCCC GTTATATCTG
  CAACATGTTC TAGCAAATAG GCCAGACGAA GACATTGTGT TTTCTATAAA CAACTTCTCT
  TAACTTGGTA AATCACATTG CCCTTCACCT TGAGTGTGTG CAAGAAGTAT AACTGAGGAA
  R
  CTGTGAGGAA GGAGATCTGA CAACCAGATC AGTTGTGAAA AGAAGGGAAC AGAGTGGAAA
  GTGAGTAAAA AAAGACGATG ATGATGTCTG CGTAGAGGCC ACTTGGACCA GAATCACTGC
  ACCTCTGGCA GCACCTGCTG CCTAGGTCCT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324130770	CHEV_12_98715793	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245042998					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:97443842 () rs orientation: forward

Symbol	Name	Function Class
Rr387670	regulatory region 387670	1999 bp upstream
Rr470847	regulatory region 470847	391 bp distal