rs245056750 SNP Detail

Summary

• ID
  rs245056750
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11890557 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACACAGGG GAGATTTCCC
  CAGCCCATTA GTGTGCTTGG CCCCCTCTCT CCATACCCAG TCCATAGAAT GAGGTGCTGT
  GTAACCCTTT TATGACCTTG AGCTTCAAAA TGATGTCACA ATAAGCAGGG ACTGGTTTCC
  TTCTGTCCAC CCTGACCTCC AGCTACTTGT GAGCCGTAGA CAAGAAGCTG AGGTAGCCAG
  Y
  TCGTGGCTTA ACCAAAACAT TGTTCCTTCT TAGAGGCTAC CAGAGAGGCA GTGCACAGAC
  CTCAGTTCTG GAACTGATGG ACAGGTTGGT GACTACCCCT CCACCCTGAG GCCAGGAGAA
  GCCCTCAAAG TTTGGCCTGT TAATTCTCTA GTACCCGTAC AAAACGCCCC AAAGATGGCC
  ACACTGCCAC CCTGTGCTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322494117	CHEV_8_11840557	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245056750					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11890557 () rs orientation: forward

Symbol	Name	Function Class
Gm15875	predicted gene 15875	128 bp upstream
Rr659647	regulatory region 659647	674 bp proximal
Tex29	testis expressed 29	within coordinates
Tssr76253	transcription start site region 76253	49 bp downstream
Tssr76254	transcription start site region 76254	27 bp downstream
Tssr76255	transcription start site region 76255	11 bp upstream