rs245098589 SNP Detail

Summary

• ID
  rs245098589
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17768897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCACAACCC CAAAAGAAGA
  GAACCGCACA AACATAACTC CAACTGTCAC AACAAAAATA AGAGAAAGCA ACAACCTTTG
  ATCCTTAATA TCTCTCAACA CTAATGGACT GAATACTCCA AAAAAAAAAA AAAAAAAAAA
  AAAAAGACAT AGGCTAGCAG GTTGCATATG TAAACAGGAC CCAGCATTTT GCTACATACA
  R
  GAAACAGTCT TCAGTGACAA GGACAGACAC TACCTCAGAA TAAAAGGCTA GAAAAAAGGT
  TTCCAAGCAC ACAGTTCCAA GAAACAATCT GGAGTAGCCA TTCTAATATA CAATAAAACA
  CAAAGAGTAT ACTTGGATGG GTTTATGGGT CCAACTACAT AAGTAGCAGA GTACTGAGCT
  ATCTGGCATC AGTGAGAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320673572	CHEV_3_17614733	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245098589					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17768897 () rs orientation: forward

Symbol	Name	Function Class
Gm56811	predicted gene, 56811	within coordinates
Tssr32670	transcription start site region 32670	81 bp upstream