rs245145317 SNP Detail

Summary

• ID
  rs245145317
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:114953296 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATCCTGGTA TTAGTCTGGT TTGCAATCAG
  AACTTAAGAT AGGGCTGtat tttttttttt tattatttGA GTAATGAAGA AAAAAATGAA
  TAGAAACTGG AAGTACTAGA GGCCAAAAAC CTTGAAAAGA CTCACTCCAC TAATAACTCA
  K
  AAAGGAGACA GCGTGTTTCC CCAACAAGAT TTGGAATAGG CTGACAAAGA ATTTTTTTTC
  TTTTTAACTA AGCTATTAAG TTAAATCCAT CAACAGAAAA ACCGCAGGAA AATGTGTGCC
  ATTTGAAAAC ATTATTTCTT TTAACTTGTA                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324534390	CHEV_13_115606968	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245145317					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:114953296 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6123	CpG island 6123	981 bp proximal
Gm34790	predicted gene, 34790	within coordinates
Mocs2	molybdenum cofactor synthesis 2	1411 bp upstream
Rr280966	regulatory region 280966	704 bp proximal
Rr404003	regulatory region 404003	1319 bp upstream
Tssr121205	transcription start site region 121205	1472 bp upstream