rs245166653 SNP Detail

Summary

• ID
  rs245166653
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:143281220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgtgtCCAT ATATCTGTCT CTGGGTGTGT
  GTCTCTATAT GTGTATTtat gtgtctatat gtgtgtatgc aggtacactc ctttaagtga
  cattgggtgt ttttctggtt catgtccact ttattttttg agacaaggtc tttcattgaa
  Y
  ctggagattg atgttttggg taggctggct gtctattaat tctatgggtc tgcttctcct
  gcctTGAGTA ATGAGTTTAT Ttagacaaac agacacacat gtgcatacac acatgcatat
  acacacatgt atagatgttc acgtacacaa                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322052275	CHEV_6_143284014	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245166653					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:143281220 () rs orientation: forward

Symbol	Name	Function Class
Rr380238	regulatory region 380238	968 bp upstream