rs245241407 SNP Detail

Summary

• ID
  rs245241407
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:37398316 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTA GATGAAGAAA TTGTTGCAGG
  W
  CACAGAAGTG GAATTTGAAG CCAGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322907195	CHEV_9_37294605	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245241407					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:37398316 () rs orientation: forward

Symbol	Name	Function Class
BB236558	expressed sequence BB236558	1687 bp downstream
Cpgi21578	CpG island 21578	1794 bp proximal
Gm69832	predicted gene, 69832	1343 bp downstream
Rr383217	regulatory region 383217	1008 bp downstream
Rr676695	regulatory region 676695	1511 bp proximal
Tssr84392	transcription start site region 84392	1750 bp upstream
Tssr84393	transcription start site region 84393	1968 bp upstream