rs245335082 SNP Detail

Summary

• ID
  rs245335082
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:5772106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTTTTGCT CCATGCTCTG
  TGCTATGTAA ATGTAACATA GTTTTAATTG TTAAAAGTGT CAACTGAAGT TATATTGGTA
  CAATCAAAAA CCATTTTTAT CTTTATCTCT ATATTAAAAA CACAAAACCA AGAAGATGTA
  AAAATAACTA TGTTATGATC TATTCTGGAC TTTGTTCAAT AGATAATCAT ATAGAGTTTA
  W
  TTCACTTTGC ATATTTTGTA TAGTTCTCAA AGTTTTATGC TATTATTCTA ACACCGTTTC
  TTTACCCCTC TATTTCTAGA CAAGTATCAC TATTATTTCC AGTTCTCTTG CAAAGTGATG
  TGTGATGTGA AAAAAAACAA AAAACAAAAA CAAAAAACAA AAAACAAGAA ACAAGAAACA
  AGAAACAAAA AAACAAAAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324223047	CHEV_13_5721353	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245335082					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:5772106 () rs orientation: forward

Symbol	Name	Function Class
Gm35330	predicted gene, 35330	within coordinates
Rr387902	regulatory region 387902	1744 bp upstream
Rr474521	regulatory region 474521	1381 bp proximal