rs245353676 SNP Detail

Summary

• ID
  rs245353676
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:121574146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggtccataa gtgactgctg tgcaaggacc
  taaaatcaga tcctccataa aagctgggct tgagacaaat gtttgtaacc tgggctgtgg
  gtgggtcaag actgttggat ccctcgagct cataggctag ctaacctaaa caatctgtgg
  K
  ctctaggctc aacgagtgac ccgtgttaaa gaaaaaggga ggggaaaatt aagaaagaca
  cctgaaacaa taatatccgg tctctacatg aaagcacata cTGAGTATGT GCACTCAAAC
  ACACAGGCAC ACACTCATGT GAACACATGC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323514828	CHEV_10_121175297	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245353676					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:121574146 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2295	CpG island 2295	1162 bp proximal
Kics2	KICSTOR subunit 2	1689 bp upstream
Rr440270	regulatory region 440270	1206 bp proximal
Tssr96047	transcription start site region 96047	1674 bp upstream