rs245395181 SNP Detail

Summary

• ID
  rs245395181
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117548603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gggatggga ggacagggca aaaggcaagc
  aggcatgcac tcttagctta aagccctggg ttccctcccc agcacctgtg ggaatgatgc
  tgcacttgtg taatcccagc actttggagg tgaagacagg agggtcagaa gttcaaaacc
  S
  ggcgtgatgc cgcacgcctt taatcccagc actcgggagg cagaggcagg tggatttctg
  agttcgaggc cagcctggtc tacagagtga gttccaggac agccagggct atacagagaa
  accctgtctc gaaaaaacca aaaaaaaaaa                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323498907	CHEV_10_117149754	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245395181					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117548603 () rs orientation: forward

Symbol	Name	Function Class
Gm56970	predicted gene, 56970	1165 bp downstream
Gm67727	predicted gene, 67727	within coordinates
Mdm2	MDM2 proto-oncogene	1940 bp upstream
Rr385357	regulatory region 385357	147 bp downstream
Rr439591	regulatory region 439591	1951 bp distal
Rr439592	regulatory region 439592	1948 bp distal
Rr439593	regulatory region 439593	1801 bp distal
Rr439594	regulatory region 439594	1855 bp distal
Rr439595	regulatory region 439595	987 bp distal
Tssr95923	transcription start site region 95923	1751 bp downstream
Tssr95924	transcription start site region 95924	942 bp downstream
Tssr99468	transcription start site region 99468	1962 bp upstream
Tssr99469	transcription start site region 99469	1925 bp upstream