rs245428943 SNP Detail

Summary

• ID
  rs245428943
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:91365582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gcaggtgga tttctgagtt tgaggccagc
  ctggtctaca aagtgagttc aggacagcca gggctataca gagaaaccct gtctcgaaaa
  aaaagaaaga gagagagaga gagagagaga gagagagaga gagagagaga gagagagaga
  R
  agaaaggaag gaaggaagga aggaaggaaa aaagaaaaaa agaaagaaag aaCAGAATGA
  AGACACAAAA ATGGGAATGT TGGGTATGAA TGAGTCGACA TTAGAACCAA TTACACATGT
  TTGTATACAT GTATAGAGAG AACACTGTAA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324117491	CHEV_12_92637248	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245428943					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:91365582 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4953	CpG island 4953	1575 bp proximal
Rr258556	regulatory region 258556	1219 bp proximal
Rr265753	regulatory region 265753	1418 bp proximal
Tssr114585	transcription start site region 114585	1630 bp upstream
Tssr114586	transcription start site region 114586	1658 bp upstream