rs245441321 SNP Detail

Summary

• ID
  rs245441321
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:70181131 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAG AAAGAAAGAA AGAAAGGAAG
  R
  AAGGAAGGAA GGAAAGAAAA GAAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	CE/J	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	KK/HlJ	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	PL/J	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss643147305	FVB_NJ_12_71235344	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	A	G	G	A	G	A	G	G	G	G	G	G	G	A	G	A	A	A	A	G	G	G	G	A	G	G	G	A	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	CE/J	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	KK/HlJ	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	PL/J	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs245441321					SNP	G	G	G	A	G	G	A	G	A	G	G	G	G	G	G	G	A	G	A	A	A	A	G	G	G	G	A	G	G	G	A	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss643147305	FVB_NJ_12_71235344	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:70181131 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4707	CpG island 4707	331 bp proximal
Gm56526	predicted gene, 56526	731 bp downstream
Rr467201	regulatory region 467201	1738 bp proximal
Rr467202	regulatory region 467202	1932 bp proximal
Tssr116556	transcription start site region 116556	1904 bp downstream