rs245461365 SNP Detail

Summary

• ID
  rs245461365
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:136609390 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAC ACAGGAGGAT ACATCTCTAG
  R
  GTTTGCTAGC CAGCTAGACT AGCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321699781	CHEV_5_137056406	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245461365					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:136609390 () rs orientation: forward

Symbol	Name	Function Class
Rr622654	regulatory region 622654	624 bp proximal
Tssr1674	transcription start site region 1674	1107 bp downstream
Tssr1675	transcription start site region 1675	1162 bp downstream
Tssr53860	transcription start site region 53860	1035 bp downstream
Tssr53861	transcription start site region 53861	1084 bp downstream
Tssr53862	transcription start site region 53862	1134 bp downstream
Tssr53863	transcription start site region 53863	1147 bp downstream
Tssr53864	transcription start site region 53864	1184 bp downstream
Tssr53865	transcription start site region 53865	1216 bp downstream
Tssr53866	transcription start site region 53866	1244 bp downstream
Tssr53867	transcription start site region 53867	1313 bp downstream