rs245475241 SNP Detail

Summary

• ID
  rs245475241
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:72426386 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATCTCATC TAGTCTCATC
  TAGCTAATAA GGGTTGCATT TTAAGGAATT TTGAGACTGA GATGAAATGT AAGGATTTTG
  AAAAATAAGC CAAAAAGCTA TCACAGAGTA TCTTCAAAAT ACCTTTTTTT TTTTTTAAAT
  GAGTTTCTTT CCAGGACCAG ATAGTGGAAA GGGTCTTGGT GGCAGGCCAT CCCCTGTGAT
  R
  TCAGAGCCTT GCCAGGCCCC AGAGGGGCTG TAAGCATTTG AGTTGAACTC TGCTGAAGGG
  CACTGATAGG ACACACAAGC AGCTTTCAAA CCTGTTTTCA GAGCTACATG GACCCACTGA
  AATATCAGCA TTGAACATCA GGGTATTGTC ATGTGTGTGG GCTTTTGTCA TTCTGAAGCT
  TATTTTTGCC AACTTTTCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320343242	CHEV_2_72434099	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245475241					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72426386 () rs orientation: forward

Symbol	Name	Function Class
Rr558998	regulatory region 558998	1627 bp proximal
Tssr18356	transcription start site region 18356	1503 bp upstream