rs245497854 SNP Detail

Summary

• ID
  rs245497854
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116240304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGTTGCAG TCCACTAATG
  GCACCTGCTA TGTTCACTTA GTAGGACTCA AAATGCTTGG GTATCAAGAA GGGCTATAAG
  CAATGTGAAA GGATACTATA GAATAAGGTC AGTTGACAGC AGTGCCTCTG CAAACCTTTG
  TGAAGGCTCT AGAATGTAGA ATTATAGTAC TGACCTAAAC TAGAGGCAAA CCTTGGATTT
  Y
  TAAAGAATAT TTAACTTTTC CATAACTTCT AAGGGATAGA AGAATCTCTC TCTCTCTCTC
  TCTCTCTCTC TCTCTCTCTC TCTCTCTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  ATATGTGTGT GTGACACACA TACATCATAC ACCACACACA TTCACACCAC ACACAAAAAC
  AAACCCCATA CACTACCCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320895011	CHEV_3_116149573	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245497854					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116240304 () rs orientation: forward

Symbol	Name	Function Class
Gm22361	predicted gene, 22361	1736 bp downstream
Gm66091	predicted gene, 66091	within coordinates