rs245571920 SNP Detail

Summary

• ID
  rs245571920
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97115353 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCTCAACA GAGGCCCTTT
  AGTGAACACC ATAGCTGGCT GGAGCATAGA CATCTATCAT CACTTAGTGA GTGTCACCCG
  GAACATAGAC ATCTATCACT TCTGTGTCAC CCATAAAGGC TCAGTCTCAC ATCCTTCACA
  GAATTTAAGT TTTTTAAAAT TATTACTTCT AAAATTCCTT TTTATGACAT GACCTCCTTC
  W
  CTATGATCTG GCCCTCAGTG TTACAGATGT TGGATGTTTT GCTTTGTGCT GAAAACAACT
  TTTCAAAGTT GTTTCCATTG TTAAAATCCC TATTTTCTTT GCCTGTTTGC ATTACTTAAT
  TCCTGCTGAC CTGTTTTCAG GTTTCTTTTT TTTTTCTTTT TTTGTCATTC CGTGCTATAA
  CCCTCACTCA ATGAATTTTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323117110	CHEV_9_97133719	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245571920					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97115353 () rs orientation: forward

Symbol	Name	Function Class
Gm29240	predicted gene 29240	515 bp downstream
Tssr2982	transcription start site region 2982	867 bp downstream