rs245585792 SNP Detail

Summary

• ID
  rs245585792
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107610575 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAAATTGC ACTTGGACTT
  TAGCTTCTGC CTGGTAAATC TCTCTAATAA TTCTTGACTT AGGACAGAAG ATGTGTTGGG
  GGTCCCATAG AAAATAAACC AGCCATAGTC CTCATGGGAC TTTGGTCAGC ACTTTGTTCG
  AAAATCTGAG TCCCCTAATA TATTTTCAGA GAGGTCAGAT TCTCTTGTCT CTCCTGCCCC
  R
  TGCTAAGTAA GAACTATTTT TCAGGAGTCT GGGTCATTTT CAAAGGTGGG AAGGGAACAG
  GAGTCTAACT CTTGAATTCA GGGATGCTTG CCCACCCTTG AAGCTCTTGT GAGTTTTTCA
  GAAGCTTCTG ATTTTCCACC CAGAATATAT CCTCTCCCAG GATCATAGTG AGCAGGCTAG
  CAGGGTGAGA GTGCCGTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320865883	CHEV_3_107506177	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245585792					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107610575 () rs orientation: forward

Symbol	Name	Function Class
Gm40121	predicted gene, 40121	within coordinates
Rr583029	regulatory region 583029	883 bp proximal