rs245594677 SNP Detail

Summary

• ID
  rs245594677
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110230760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTGCTGTG CCAGTGGGTT GGGGGGGGGG
  GGGTCTGAAG GGGTTGCGGA AACTGCGAAG AGCAGAGACC ACCTTGGCCT CACCGACAGA
  GGCTCAAAGC CACTCACTCG AGTTCTTTCT TTAAGCCAAG GTTTGTCCCG TAGCCACAGA
  R
  CCCTTCAGCC AAAACCTTAC TCTGGCAGAA CTTCAACCTA CCAGACAAAG CCGCCAAAGA
  CAGGTTGGGC ACCGGCTTAG GGGCAGCTGG GAACAGGCAT CTAGCCTTCG TCTGAGGGAG
  TCTTATGACC TCAGGGAATT CAAGGCAAGT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322397541	CHEV_7_117775067	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245594677					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110230760 () rs orientation: forward

Symbol	Name	Function Class
Adm	adrenomedullin	1733 bp downstream
Cpgi19578	CpG island 19578	750 bp distal
Gm28863	predicted gene 28863	656 bp upstream
Gm72687	predicted gene, 72687	1331 bp upstream
Rr400547	regulatory region 400547	1045 bp downstream
Rr653271	regulatory region 653271	1342 bp distal
Rr653272	regulatory region 653272	841 bp distal
Rr653273	regulatory region 653273	1187 bp distal
Rr653274	regulatory region 653274	160 bp proximal