rs245606427 SNP Detail

Summary

• ID
  rs245606427
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:18268719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGA TTATATTTTA GTTAAATTTT
  W
  AAAAATGACA TGGACAGCAC CCTGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323928266	CHEV_12_18225524	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245606427					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:18268719 () rs orientation: forward

Symbol	Name	Function Class
Bnip3l-ps	BCL2/adenovirus E1B interacting protein 3-like, pseudogene	1464 bp downstream
Gm40879	predicted gene, 40879	1211 bp upstream
Gm58964	predicted gene, 58964	1045 bp downstream
Tssr112909	transcription start site region 112909	1500 bp downstream