rs245613088 SNP Detail

Summary

• ID
  rs245613088
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:41020258 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTG TTTGTTTGTT TGTGAAACAG
  R
  GTCTCTCTAG ATATCCTCGC TGTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325808834	CHEV_19_41106310	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245613088					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:41020258 () rs orientation: forward

Symbol	Name	Function Class
Dntt	deoxynucleotidyltransferase, terminal	within coordinates
Rr365008	regulatory region 365008	1658 bp distal
Rr365009	regulatory region 365009	1058 bp distal
Rr370497	regulatory region 370497	535 bp downstream
Tssr5510	transcription start site region 5510	603 bp upstream
Tssr159242	transcription start site region 159242	683 bp upstream
Tssr159243	transcription start site region 159243	656 bp upstream
Tssr159244	transcription start site region 159244	639 bp upstream
Tssr159245	transcription start site region 159245	626 bp upstream
Tssr159246	transcription start site region 159246	225 bp downstream
Tssr159247	transcription start site region 159247	239 bp downstream