rs245613645 SNP Detail

Summary

• ID
  rs245613645
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48918779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCCATCCT TTGCTACACA
  GTGAGTTCAA GGCTAGCCTG AGATACAGGA CACTCTGTCT TATGTATAAA CAAAGGCTCT
  TAGGATAGAA ACACCTGCAG CTTTATGATC TACTGAGAAT CCTCTAGAAG GACGAGTCAG
  GGCCCTGAGA GAAAGCAGGT CATGACAGCA GGAGACTGGG AGACCTTGGC TGAAGAAATA
  R
  TAGGGAAATT TGCAAGAGGG AAGCTGCTGG TGGTAGCTTG TGTGGTATGG GACTGGCCAG
  CTTCCTGCGA TTTCCATGCT GTGGGCCACC CCCACCCCCC ACCCCAACCC TGTCCTCAAG
  CCTATCTCAT CTGTTTCCAG CTGTCCTCCC ACCAATCTTG CACATCCTGC AGTTTGTGGA
  GCCTCACTCC CAGACCACAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325409611	CHEV_17_48751076	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245613645					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48918779 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9295	CpG island 9295	within coordinates
Gm64620	predicted gene, 64620	within coordinates
Rr528326	regulatory region 528326	1930 bp proximal