rs245626859 SNP Detail

Summary

• ID
  rs245626859
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:93121186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATCTGTTGT CACAGAAAGC TCCATGGGAC
  AATACCCAAT GAGAGCTGCA GAGAAGACCC CGCTGATAAT CACAGTGCCC TGGTAGCAAA
  AGCCCTAGAA AAAAAAAGGC TGTTGCCTGG GGCCCCTGCT CTCTGAAGTT TCAACCCGCC
  M
  AATGTTTGCT GAACTCTGAC CTCTGAACTC TCATGTGACC CCTGAAAGAA AAGGAACAAC
  ACTTACCCAG CCAGCTCCCA TTTCCACGCT CTAAATGGTG ACCTTTTCAC CAAAACATGG
  GGAGTTTGTG GCCCACTCAA CCCAGTGTCA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320395293	CHEV_2_93130998	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245626859					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93121186 () rs orientation: forward

Symbol	Name	Function Class
Rr561147	regulatory region 561147	within coordinates
Tspan18	tetraspanin 18	Intron