rs245667315 SNP Detail

Summary

• ID
  rs245667315
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13263396 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGACAAGCC TTTGCCACCA
  GAAACCCTCG GGAGTTTTTC CACGTAATGA ACCTCCACGC AGGTCAATCT GAGTCTGCAC
  TCCGCTGCTC CAGAGGAGTT GAAGAGCAAA GATGGTCACT GATCTTGTTT CCCATTTTTC
  TCCCAGTCAG AACCTCTGGT GGCAGAGATG TTTGTGTAGT CACATGGTGG ACCCAATGCT
  Y
  GTTGTTATGT CCCAGCACAC GATCAGGAGT CCCCTGACCC TTCAGGCCTT CAGGAGGGGT
  CACCATGACC TAGCAAGCGT ATCTGTTCTC CTCATTGCTC TAGCTGCCGC GTGGTACCTG
  CTCACTGGGG TGCTCAGTGG TTGCTGACCA CAGAAAGCCC ACAGATGACT ATTTTCTGCC
  ATCTGCTTCA TCTGTGGTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505129	CHEV_8_13213396	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245667315					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13263396 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	within coordinates
Rr368495	regulatory region 368495	71 bp upstream
Rr368496	regulatory region 368496	576 bp upstream
Rr659886	regulatory region 659886	within coordinates
Rr659887	regulatory region 659887	46 bp proximal
Rr659888	regulatory region 659888	637 bp proximal
Rr659889	regulatory region 659889	687 bp proximal