rs245677004 SNP Detail

Summary

• ID
  rs245677004
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120754416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGGATAG CAAAAAGTCT
  TCTCAAGGAT AAAAGAACCT CTGGTGGAAT CACCATGCCT GACCTAAAGC TTTACTACAG
  AGAAATTGTG ATAAAAACTG CATGCTACTG GTATAGTGAC AGACAAGTAG ACCAAATGGA
  AAAGAATTGA AGACCCAGAA ATGAACCCAC ACACCTATGT TCACTTGATC TTCAACAAGG
  R
  AGGTAAAACC ATCCAGTGGA AGAAAGACAG CATTTTCAAA AAATGGTGCT GGCACAACTG
  GTGGTTATCA TGTAGGAGAA TGCAAATTGA TCCATTCCTA TCTCCTTGTA CTAGGGTCAA
  ATCTAAGTGC ATCAAGGAAC TCCATATAAA ACCAGAGACA CTGAAACATA TAGAGGCGAA
  AGTGGGGAAA AGCCTCAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325960948	CHEV_X_118958328	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245677004					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120754416 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	1294 bp upstream