rs245763346 SNP Detail

Summary

• ID
  rs245763346
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24010097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAACAGGCT CACACTTAAC
  AAGGTACTTG GAATGGCTTT ACTCCTGGTG GGCAAAAAGG GTTGACAGAG TTAGTCCCCA
  AGGCTCAAGA AAGTGTCAGC ATGGATGGAG TCTGCACTGT TTGTCCTTCA CTTGTACTGC
  TGAGAGGCCA TCCCCACCCC CAAAGGCAGC CACATTGAGT TTTAAACCTC AGGATCCACA
  R
  GACCCATAAA CCAGTGCTCT GAAACCAGCC TGCTCCCAGT GGAAGGCCCA GCCTGACCTG
  CACTAATCAG GTGACATCCT TTAGGAGGAG CAAGAACAAA GCCTGAGGTT ACCAGTTCCT
  GCAGTGCAGA ACACTGTTCT CTGAGCATAA CGGCCTTAGC CATCTTTTTT TTTTTTTTTT
  AAGATTTCCT TTTTATCGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325327387	CHEV_17_23928090	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245763346					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24010097 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8694	CpG island 8694	309 bp distal
D930048G16Rik	RIKEN cDNA D930048G16 gene	within coordinates
Gm52285	predicted gene, 52285	within coordinates
Rr339285	regulatory region 339285	within coordinates
Srrm2	serine/arginine repetitive matrix 2	within coordinates
Tssr142954	transcription start site region 142954	453 bp downstream
Tssr146666	transcription start site region 146666	1210 bp upstream