rs245784106 SNP Detail

Summary

• ID
  rs245784106
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115909061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCTGAGCA CTCCTCCCTG
  TGTATCTGAG CACTCCTCCA CATGTTTCTG AGTACTCCTC CCTGTGTATC TGAGCACTCC
  ATGAATATCT GAGCACTCCT CCACGTGTAT CTGAGCACTT CATGTGTATC TGAGCACTCC
  TCCACATGTA TATGAACATT TTTCCCTGTG CTTAGCAATT TCACCTGGCT TGTTCCCCCC
  A
  CCCCCCCACC CCCGGAAAGC ATTTCTTCAT CAAGGCCTCA GAATTTTCTG TGTATCTAAT
  TTTGGAATCT CTAACGTAGT TAGGATCTTT CAAGTTATCT TCTCAAGAAA GATAGCCACT
  GAGCCACTCA GTCATTCAAT AACCAAGTAT TTCCAAATTG GCATGTCATG GTGGATCACC
  ACACCATGTG TGCATCCATG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BR/cdJ	CE/J	CZECHII/EiJ	DBA/1J	FVB/NJ	JF1/MsJ	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SWR/J
ss379048609	MGP_WTSI_9_115989111	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BR/cdJ	CE/J	CZECHII/EiJ	DBA/1J	FVB/NJ	JF1/MsJ	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SWR/J
rs245784106					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss379048609	MGP_WTSI_9_115989111	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115909061 () rs orientation: forward

Symbol	Name	Function Class
Gm18328	predicted gene, 18328	within coordinates