rs245858443 SNP Detail

Summary

• ID
  rs245858443
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:108702810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ccatgtgca tgcagggcct gtggaggcca
  gagaagggtg ctggatcctg tgggacagga gttacggatg gttgtgggtg ctgggatgaa
  cctgggtcct ctggaagatc agtgtatccc taaatcctca gtgatcAGTG GAGGATGGAA
  R
  GGACATGcct caagtgtctg acaatgtctg cccagacaat tggctgactg caactacaca
  ggcacaaaca accactaagc caaactgaaa aactgaaaaa ctcaaaagac tgaagtggcc
  attcacagca agagagaaag ccaacagttt                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320866899	CHEV_3_108598412	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245858443					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108702810 () rs orientation: forward

Symbol	Name	Function Class
Gm66359	predicted gene, 66359	447 bp upstream
Rr583317	regulatory region 583317	175 bp proximal
Rr583318	regulatory region 583318	458 bp proximal
Stxbp3	syntaxin binding protein 3	Intron