rs245860260 SNP Detail

Summary

• ID
  rs245860260
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:120124458 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atgtcccca tgcacatatc taaacaatta
  caaaaagtaa GTCTTTCAAA AAGAAagaag atcaggtaga gagtgattga gaaagacacg
  tgatattgac ctctgtcctc cctacaAGAA TGTGCACTCT CATGcacaca ttcacacaca
  W
  atgaacacta cacacacaca cacacacaca cacacacaAT CTGTAGATGC TGAACACAAT
  GTTATATTCC ACACACGCAG GCACTCATGA TGCTGGGACT TCCAGTGAGG TAGGCACCTC
  TATCACCCTG CTTGCCAGTG TCTGCCAGTC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319932145	CHEV_1_122093305	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245860260					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:120124458 () rs orientation: forward

Symbol	Name	Function Class
Rr396237	regulatory region 396237	512 bp upstream
Rr417161	regulatory region 417161	420 bp proximal
Rr417162	regulatory region 417162	621 bp proximal