rs245925960 SNP Detail

Summary

• ID
  rs245925960
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172695598 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGGAGGGTC TGGACCACGG
  AGGATCTCAA CTGACCTCAC TCCGGTTCCA GGAGATCCAG TGCCTCCTCT GGCCTCTGTG
  AGCTCTGCCT GCACACAGAC ACACAACAGG CGAACACACC CATGCACATA AAACAAATGA
  TAATGAGGAG GAGGAAGAGG AGGAGGAAGA GGGGGAGGGA TGCAGCTCAA GCGGTGCAAC
  A
  TTTGCCTAGT GTGCAGGGAC CCCTGGGTTT GGTCCTCGGC TCTGTGTAAG TTAAACACGG
  CGAGCACGGT AGTGATCGCT GTCACCCCAG CACTCGGGAG GTAGAGGCTA GAGGATCAGA
  AGTTCAAGGC CATCCTTAGC TACATAGACA TAGAAGCCTG GGCTACATGA GACACTATCT
  GAGAGAGAGA GAGAGAGAGA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320620539	CHEV_2_172679306	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245925960					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172695598 () rs orientation: forward

Symbol	Name	Function Class
Gm36254	predicted gene, 36254	within coordinates
Rr571755	regulatory region 571755	327 bp proximal
Rr571756	regulatory region 571756	552 bp proximal