rs245942186 SNP Detail

Summary

• ID
  rs245942186
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:28092311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATGAAAT TTTCATTTTG
  TAGCATGTCT AAGCCTACTC TCACTACAGC CTCCAGGAAA TGATTTTGTC TTATTACAAA
  GGAAAATTAG AAAAATGAAG TAAGTCCTAC TGACAGCTTA GGTACTTAAA AGTATAAAAT
  ACTATTGTTT GACAACATAT TGATTAATGA CTAATGGGCT CACAGATCAT TTTCTACCAA
  S
  AGAATATAAA AATATATTGA CAAATTGGGA CAGAAAGGTG CTGGCCATGT AAGCATGGGG
  ATTTTTATTT GAGTCATCAC CCAGAACTCA CATTAAAAAG TCAATTGTAG CAGCGTCAAT
  CTGTATTTCC AGTGCTGGAG TGGCTGAGAC AAGAAGCTCC CTGGAGCAGG TTGGCCAGGA
  GTCTAGCTGA ATTTCCCCTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325123274	CHEV_16_28273645	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245942186					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:28092311 () rs orientation: forward

Symbol	Name	Function Class
Fgf12	fibroblast growth factor 12	within coordinates
Tssr140647	transcription start site region 140647	749 bp downstream