rs245942299 SNP Detail

Summary

• ID
  rs245942299
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116242617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAACACATT TAGATGGGTG
  GATAAAGTAG TCAGGGGTTT GGAAGCTTGC CCTTGCACAT GTTAGGTGAG CATCCTACGA
  CTGAGCTACA TCGCCAGTCC TATGTCCTAT CTGTTGATCA TTTGGCATCA ATAATTCTTC
  ATTGTGTATG TGGGAGGGGG CTGTCCTGCA TACCGTAGGG TGGCTAGTGC CATCCCCGAC
  R
  TACAGCCATC ATATCACCTC TTTGCAACTG AAACAAAACA TCCTCAGACA TTGCAGAGGG
  TCTCAGACCA GCAGGAGCAG TCCATTTTGA GAATCTCTAT AGAAAACAGT TAGTAGCTGC
  TTTGAAGAAC ATGTCAACTT TGTCATATCA GTCTTCCTAA TTGCCCAGTT AGTGATTTCC
  TCTCTATAGC TAAATAATAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320895040	CHEV_3_116151886	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245942299					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116242617 () rs orientation: forward

Symbol	Name	Function Class
Gm22361	predicted gene, 22361	404 bp upstream
Gm66091	predicted gene, 66091	within coordinates