rs245971349 SNP Detail

Summary

• ID
  rs245971349
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34518080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACCGTTTCT TGTGGGTGAT TTTGGGATGT CGCCTCTCCT
  GAGTCAGAAC GTTGAGGGTC TTTCAGTGGC AGCTCACAAC TGTCTGTAAC TCCAGTTTCA
  R
  GAGATCTGAT GCCCTCACAC AGACATACAT GTGTGCAGGC AAAAAACACT AACGCACATA
  AATAAAAATA ACTCATTTTT TAAAGGGTGA GTCCTCCGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322574595	CHEV_8_35113980	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245971349					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34518080 () rs orientation: forward

Symbol	Name	Function Class
Gm9951	predicted gene 9951	within coordinates
Gm40486	predicted gene, 40486	1556 bp downstream
Gm40487	predicted gene, 40487	within coordinates
Tssr80884	transcription start site region 80884	1971 bp upstream