rs245992205 SNP Detail

Summary

• ID
  rs245992205
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:56531780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGATGGTGT TGCATTTTGG
  GTAGAGATGT TCTGAATTGA GATTTCATCT TGGTGAGTGT TTCCTTTGAT GAATATGAAG
  TGTTTTCCCC CATCTTGTTT GATAACTTTT GGTTGAAAGT AAATTTTATT GGATATTAGA
  ATGGCAATCC CTGATTGTTT CTTAGAAGTA TTTGCTAGGA AAACAGTTTT TCAGCCTTTT
  Y
  CTCTGAGGTA GCATCCATCT TTGTTGTTGA GGTGTGTTTC TTGTATGCAT TAAAATGCTG
  GATCCTGCTG GGCGTGGTGC TGCACGCCTT TAATCCCAGC ACTCGGGAGG CAAAGGCCGG
  CAGATTTCTG AGTTTGAGGC CAGCCTGGTC TACAAAGTGA GTTCCAGGAA AGCCAGGGCT
  ATACAGAGAA ACCCTGTCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323314502	CHEV_10_56375490	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs245992205					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:56531780 () rs orientation: forward

Symbol	Name	Function Class
Gm9795	predicted pseudogene 9795	510 bp upstream
Gm66844	predicted gene, 66844	243 bp downstream
Tssr93379	transcription start site region 93379	241 bp upstream