rs246005680 SNP Detail

Summary

• ID
  rs246005680
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:66964422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCT GAGCTTCTTG CTCTTCGTAC
  R
  GCAGCCGAGC TGCCTGCAGC CATGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322686829	CHEV_8_69035669	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246005680					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:66964422 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20395	CpG island 20395	within coordinates
Gm63911	predicted gene, 63911	748 bp upstream
Tktl2	transketolase-like 2	within coordinates
Tssr77575	transcription start site region 77575	27 bp downstream
Tssr77576	transcription start site region 77576	6 bp downstream