rs246021527 SNP Detail

Summary

• ID
  rs246021527
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:55475157 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTACATA TTGAAACCTT
  CTTTAAAAAG TAAACAAAAC CCCTGACAAA TAAACAAACA ACAACAGCAA CGGAATAGAA
  AGGAAGGGAG GGAGGAAGGA CCCCAGCAAC AGCACAAATC AAATAGAAAA TAACACACTG
  GCAAGGATGT GAAGGAATTC CTAGCACAAG CACAGACTGG GGGAAGGGTG GGGGGGGGGG
  S
  GGCAATGTAA AATGATACAG AGGCTATAGA AATAGCATGT GGTTTGGTTT TTGTTTTTTT
  TTTAAATATT TATTTATTTA TCTATTTAGA AAACTCAAAC ACAGAATTGT ACACGACCCA
  ACAATTCTAC TTCTGGTGAG ATTGCCAAAA GTTTTAAAAG CAGTAATTGT GCAAATGTAC
  TCAGAGAGAT AGAGCTGAGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321127975	CHEV_4_55488029	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246021527					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:55475157 () rs orientation: forward

Symbol	Name	Function Class
Gm12510	predicted gene 12510	within coordinates
Rr376520	regulatory region 376520	within coordinates
Tssr41779	transcription start site region 41779	222 bp downstream