rs246106284 SNP Detail

Summary

• ID
  rs246106284
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:75595915 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTCTCAAA AGAAAGCCTC TGACGGTGTA
  ATTATATACT GAGTCAACCT CCAAGAATCA AGAACCCTTC CTAGCTGTCC TCTTAATCTT
  AACCAACCAC CAGCTCAGAA TACATACAGA ACTTGGGCCT GGCTACATAG CTGGGCGCTG
  Y
  GAGGCCAGCT TGGGCTGCCT GAGCATCAGG CTTTACCAAA TGGACCCCAC GGTGAGGAAT
  GCAGCTCGGT GGTGGAGAGC TGGCATGGCA TGCCTTCACC CCGGGCTCAG TTCCCAGCGG
  ATGGGAGGAG GAGGAGGAGT AAGTACAATG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324102532	CHEV_12_76650128	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246106284					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:75595915 () rs orientation: forward

Symbol	Name	Function Class
Gm59526	predicted gene, 59526	within coordinates
Ppp2r5e	protein phosphatase 2, regulatory subunit B', epsilon	within coordinates
Tssr116681	transcription start site region 116681	495 bp downstream
Tssr116682	transcription start site region 116682	502 bp downstream
Tssr116683	transcription start site region 116683	527 bp downstream